ESAV - DZERV - Artigo em revista científica, indexada ao WoS/Scopus
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- Targeted-Amplicon NGS for Blastocystis sp. in Shepherd Dogs of Portugal Discriminates Co-Colonization with Multiple Zoonotic SubtypesPublication . Sara Gomes-Gonçalves; Maria João Feiteiro; Guilherme Moreira; Rita Cruz; Fernando Esteves; Helena Vala; João R. Mesquita; Cruz, Rita; Esteves, Fernando; Vala Correia, Helena Maria
- Greenhouse Gas Emissions and Ryegrass Yield after Application of Solid-Liquid Pig Slurry and Biochar to an Agricultural SoilPublication . Pereira, José Luís da Silva; Perdigão, Adelaide; Bonifácio, Gabriel; Figueiredo, Vitor; Marques, Francisco; Trindade, Henrique; Ferreira Wessel, DulcineiaBackground: The application of animal slurry to the soil improves its quality, as manure contains many nutrients for plants. However, this could negatively impact the environment. Objective: This field study investigated the effects of the addition of biochar after the mechanical separation of Whole pig Slurry (WS) into Solid (SF) and Liquid Fractions (LF) on Greenhouse Gases (GHG) emissions (N2O, CO2, and CH4) and ryegrass (Lolium multiflorum Lam. cv magnum) yield. Methods: Biochar (1.0 kg m-2) was applied in plots alone or together with each of the three slurries (80 kg N ha-1) in a total of eight treatments with three replications, including just soil with and without biochar as controls. Soil properties, Greenhouse Gas (GHG) fluxes, and yield were measured during theautumn/winter growing season. Results: The results showed that the addition of biochar to these three slurries significantly increased the soil pH and showed no impact on the other physicochemical properties. The GHG emissions were not significantly different between treatments with and without biochar. The N use efficiency increased significantly in SF > WS > LF, whereas no differences were observed among these three slurries with and without biochar. Conclusion: It can be concluded that the addition of biochar combined with WS or SF/LF to sandy-loam soil appears to have no impact on GHG emissions and ryegrass yield during the autumn/winter season. Overall, this finding suggests that amounts higher than 1.0 kg m-2 of biochar combined with SF may need to be applied to soil to reduce GHG emissions and nitrate leaching and increase N use efficiency and crop yield
- Production and characterization of powder from drone brood of honeybees (Apis mellifera)Publication . Goncalves, J. C.; Vouga, Beatriz; Costa, Cristina Amaro Da; Gonçalves, Fernando Jorge; Coelho, Catarina; Guiné, Raquel; Correia, PaulaDrone bee brood are a natural source of food with potential for human nutrition. This work aims to investigate the production and extraction of the drone bee brood (larvae and pupae), as well as the production of powder from this insect for food applications. To produce the drone brood (DB), in some hives of the colony appropriate empty frames were placed. Some measurements were done in the hive to monitor the global wellbeing of the colony, namely, temperature, relative humidity, and weight. After approximately one month, the frames were removed from the hives and frozen. The yield of DB by frame was 38%. For the extraction of the drone brood, different methods were tested, being the best ones the cold room extraction (∼ 6.5 °C), on a cold surface extraction (∼ 11 °C), and in boiling water extraction (100 °C). The results show that the extraction efficiencies were 74.3% (336.3 s), 62.5% (246.8 s) and 84.9% (332.0 s), for extraction in a cold room, on a cold surface, and in boiling water, respectively. After extraction, two drying processes were tested: evaporation and freeze-drying, being the last one the recommended, preserving in a better way the appearance and composition of the DB. DB powders presented different colour characteristics according to the extraction method used. The powder obtained by boiling extraction was darker than the one produced with cold extraction. Powders are rich in protein, fat and carbohydrates, being the fat content quite high for DB powders produced by boiling extraction method.
- Exploring the Potential of Machine Learning Algorithms Associated with the Use of Inertial Sensors for Goat Kidding DetectionPublication . Gonçalves, Pedro; Marques, Maria do Rosário; Belo, Ana Teresa; Monteiro, António; Morais, João; Riegel, Ivo; Braz, FernandoThe autonomous identification of animal births has a significant added value, since it enables for a prompt timely human intervention in the process, protecting the young and the mothers’ health, without requiring continuous human surveillance. Wearable inertial sensors have been employed for a variety of animal monitoring applications, thanks to their low cost and the fact that they allow less invasive monitoring process. Alarms triggered by the occurrence of events must be generated close to the events to avoid delays caused by communication latency, which is why this type of mechanism is typically implemented at the network’s edge and integrated with existing auxiliary mechanisms on the Internet. Although the detection of births in cattle has been carried out commercially for some years, there is no solution for small ruminants, especially goats, where the literature does not even report any attempts. The current work consisted of a first attempt at developing an automatic birth monitor using inertial sensing, as well as detection techniques based on Machine Learning, implemented in a network edge device to assure real-time alarm triggering. Thus, two concept drift detection techniques and seven kidding detection mechanisms were developed using data classification models. The work also includes the testing and comparison of learning results, both in terms of accuracy and of computational costs of the detection module, for algorithms implemented. The results revealed that, despite their simplicity, concept drift algorithms do not allow kidding detection, whereas classification-algorithm-based static learning models do, despite the unbalanced character of the dataset and its reduced size. The learning findings are quite promising in terms of computational cost and its suitability for deployment on edge devices. The algorithm demonstrates behavior changes four hours before kidding and allows for the identification of the kidding hour with an accuracy of 61%, as well as the capacity to improve the overall learning process with a larger dataset
- Biochar as an Alternative Litter Additive to Mitigate Gaseous Emissions from Broiler Housing and Subsequent StoragePublication . Pereira, José L.S.; Martins, Filipa; Bonifácio, Gabriel; Garcia, Carla; Teixeira, José; Trindade, HenriqueBroiler farming is a significant source of gaseous emissions. The aim of this study was to assess the effects of different litter additives on the emission of NH3, N2O, CO2, and CH4 during broiler housing and subsequent manure storage. The gaseous emissions from the housing facilities were evaluated during one fattening cycle in environmentally controlled rooms with three different additives applied to the litter material (10% w/w aluminum sulphate or biochar and 2.50 mg m−2 urease inhibitor), as well as a control. A storage experiment was conducted under laboratory conditions for 90 days to evaluate the influence of these three additives on gaseous losses. During broiler housing, the results indicated that NH3 emissions were reduced significantly (40–60%) by litter additives, while global warming potential (GWP) emissions were reduced significantly (31%) by Alum. The addition of Biochar (a 58% reduction) had the same significant effect as Alum (a 60% reduction) to mitigate these losses. The re-application of Urease (a 41% reduction) may be required to reach an equal or higher reduction. During storage, NH3 and GWP emissions were not significantly affected by the litter additives. During broiler housing and subsequent manure storage, NH3 emissions were reduced significantly (22–41%) by litter additives, whereas GWP emissions did not decrease significantly. Globally, it can be concluded that Biochar appears to be a good alternative to Alum due to its equal effectiveness in mitigating NH3 losses, without increasing the GWP potential in the housing and avoiding pollution swapping.
- Implications of seasonal and daily variation on methane and ammonia emissions from naturally ventilated dairy cattle barns in a Mediterranean climate: A two-year studyPublication . Rodrigues, Ana R.F.; Silva, Maria Eduarda; Silva, Vanessa F.; Maia, Margarida R.G.; Cabrita, Ana R.J.; Trindade, Henrique; Fonseca, António J.M.; Pereira, José L.S.Seasonal and daily variations of gaseous emissions from naturally ventilated dairy cattle barns are important figures for the establishment of effective and specific mitigation plans. The present study aimed to measure methane (CH4) and ammonia (NH3) emissions in three naturally ventilated dairy cattle barns covering the four seasons for two consecutive years. In each barn, air samples from five indoor locations were drawn by a mul- tipoint sampler to a photoacoustic infrared multigas monitor, along with temperature and relative humidity. Milk production data were also recorded. Results showed seasonal differences for CH4 and NH3 emissions in the three barns with no clear trends within years. Globally, diel CH4 emissions increased in the daytime with high intra-hour variability. The average hourly CH4 emissions (g h 1 livestock unit 1 (LU)) varied from 8.1 to 11.2 and 6.2 to 20.3 in the dairy barn 1, from 10.1 to 31.4 and 10.9 to 22.8 in the dairy barn 2, and from 1.5 to 8.2 and 13.1 to 22.1 in the dairy barn 3, respectively, in years 1 and 2. Diel NH3 emissions highly varied within hours and increased in the daytime. The average hourly NH3 emissions (g h 1 LU 1) varied from 0.78 to 1.56 and 0.50 to 1.38 in the dairy barn 1, from 1.04 to 3.40 and 0.93 to 1.98 in the dairy barn 2, and from 0.66 to 1.32 and 1.67 to 1.73 in the dairy barn 3, respectively, in years 1 and 2. Moreover, the emission factors of CH4 and NH3 were 309.5 and 30.6 (g day 1 LU 1), respectively, for naturally ventilated dairy cattle barns. Overall, this study provided a detailed characterization of seasonal and daily gaseous emissions variations highlighting the need for future longitudinal emission studies and identifying an opportunity to better adequate the existing mitigation strategies according to season and daytime.
- Influence of Different Agro-Food Waste on Ammonia and Greenhouse Gas Emissions during CompostingPublication . Pereira, José; Costa, Telma; Figueiredo, Vítor; Marques, Francisco; Perdigão, Adelaide; Brás, Isabel; Ferreira Silva, Maria Elisabete; Ferreira Wessel, DulcineiaComposting is one of the best organic waste management techniques, with zero waste; however, it generates environmental impacts. The objective of this study was to evaluate the emission of NH3, N2O, CO2, and CH4 from the composting of olive, elderberry, and grape agro-food waste. The experiment was carried out using reactors receiving straw as control and three treatments receiving mixtures of straw and olive, elderberry, or grape wastes. The gas emissions were measured for 150 days, and the composition of the mixtures and composts was determined. The results showed NH3 and CH4 emissions were reduced by 48% and 29% by the Olive and Elderberry treatments, while only NH3 loss was reduced by 24% by the Grape treatment. Nitrous oxide, CO2, and GWP emissions were reduced by 46%, 32%, and 34% by the Olive treatment, while these losses were not reduced by the Elderberry or Grape treatments. It can be concluded olive waste can effectively reduce NH3 and GWP, while elderberry and grape wastes are also effective in reducing NH3, but not GWP. Thus, the addition of agro-food waste appears to be a promising mitigation strategy to reduce gaseous losses from the composting process.
- Soil legislation and policies: Bibliometric analysis, systematic review and quantitative approaches with an emphasis on the specific cases of the European Union and PortugalPublication . Martinho, Vítor; Ferreira, António José Dinis; Cunha, Carlos; Pereira, José; Sánchez-Carreira, María del Carmen; Castanheira, Nádia Luísa; Ramos, Tiago BritoThe literature shows that there are dimensions related to soil legislation and policy in the European Union contexts that can be better explored through bibliometric analysis, systematic reviews and quantitative approaches. Therefore, this research aims to analyse documents on soil legislation and policies, highlighting the specific cases of Portugal and the European Union (EU). The aim is to identify suggestions to improve the Portuguese and European Union soil policy instruments and measures. To achieve these objectives, a bibliometric analysis (considering text and bibliographic data) and systematic review were carried out, as well as a survey of the available soil legislation (considering qualitative data and quantitative analysis). The results show that soil legislation and policy have become more relevant in recent years and that concerns are about soil health, protection and safety, as well as risk mitigation, biodiversity preservation and the maintenance of ecosystem services. However, some topics could be further explored in future research, namely those related to multidisciplinarity, smart methodologies, soil salinisation, innovation and quantitative approaches to assessing policy impacts. This study presents suggestions that can be considered by the Portuguese and European Union policymakers to improve the respective soil legislation and policies. Defining a regulatory system for soils in the European Union has not been easy over time, although there have been attempts, given the specificities of the contexts related to soils and the reluctance of some member states to take certain measures. The approaches and analysis topics considered are innovative (there aren't many scientific documents on the topics that address bibliometric analysis and quantitative assessments with qualitative data) and bring novelty to the literature.
- Molecular evidence of sporadic Coxiella burnetii excretion in sheep milk, central PortugalPublication . Pires, Humberto; Santos-Silva, Sérgio; Cruz, Andreia V.S.; Cardoso, Luís; Lopes, Ana Patrícia; Pereira, Maria; Nóbrega, Carmen; Mega, Cristina; Santos, Carla; Cruz, Rita; Esteves, Fernando; Vala, Helena; Matos, Ana Cristina; Barradas, Patrícia F.; Coelho, Ana Cláudia; Mesquita, João R.Coxiella burnetii is the etiologic agent of Q fever, a worldwide zoonosis. Cattle, sheep and goats are considered the main reservoirs of the disease. Transmission to humans occurs mainly through the inhalation of infectious aerosols from milk, faeces, urine, and birth products from infected ruminants. In this study, a 2-year longitudinal approach was performed to ascertain the excretion of C. burnetii in bulk tank milk samples of sheep from a mountain plateau in central Portugal, with sampling conducted during the years 2015 and 2016. From a total of 156 bulk tank milk samples tested by qPCR, only one showed to be positive for C. burnetii (1.28% [95%CI: 0.03–6.94]), from 2015, the first year of collection. Bidirectional sequencing and phylogenetic analysis of IS1111 transposase partial region confirmed the presence of C. burnetii DNA. The presence of C. burnetii in raw milk samples highlights the necessity for additional research to determine if raw milk is a potential source for human infection. Animal health surveillance and prevention measures against this zoonotic disease should be considered.
- Aloysia citrodora extract as a chemopreventive agent against HPV16-induced lesions: findings from K14-HPV16 micePublication . Medeiros-Fonseca, Beatriz; Faustino-Rocha, Ana I.; Silva, Jéssica; Silva, Mónica G.; Pires, Maria João; Neuparth, Maria João; Vala, Helena; C, Vasconcelos-Nóbrega; Dias, Maria I.; Barros, Lillian; Gonçalves, Lio; Gaivão, Isabel; Bastos, Margarida M. S. M.; Félix, Luís; Venâncio, Carlos; Medeiro, Rui; Costa, Rui M. Gil da; Oliveira, Paula A.Aim: Aloysia citrodora has a long history of traditional use in treating various ailments. This study evaluated the in vivo chemopreventive efficacy and systemic toxicity of an extract of A. citrodora in a transgenic mouse model of HPV16 (human papillomavirus type 16)-induced cancer. Methods: The experiment involved six groups (n = 5): group 1 (G1, wild-type (WT), water), group 2 (G2, HPV, water), group 3 (G3, WT, 0.013 g/mL), group 4 (G4, HPV, 0.006 g/mL), group 5 (G5, HPV, 0.008 g/mL), and group 6 (G6, HPV, 0.013 g/mL). Throughout the assay, humane endpoints, body weight, food, and water consumption were recorded weekly. The internal organs and skin of the mice were collected for analysis after they were sacrificed. Toxicological parameters that were studied included hematological and biochemical blood markers, splenic and hepatic histology, and hepatic oxidative stress. Results: A. citrodora extract seems to reduce the incidence of dysplastic and in situ carcinoma skin lesions induced by HPV16 in this model, suggesting that dietary supplementation with concentrations of 0.008 g/mL and 0.013 g/mL may have beneficial chemopreventive effects. Conclusions: The extract did not induce any concentration-dependent toxicological effects on any of the parameters included in the study, indicating a favorable toxicological profile under these experimental conditions.